Publications
Below you can find a list of our published research.
Below you can find a list of our published research.
8684 results
Journal of imaging, Volume 11, Issue 2, 18 3 2025, Pages 65 Impact of Data Capture Methods on 3D Reconstruction with Gaussian Splatting. Rangelov D, Waanders S, Waanders K, Keulen MV, Miltchev R
This study examines how different filming techniques can enhance the quality of 3D reconstructions with a particular focus on their use in indoor crime scene investigations. Using Neural Radiance Fields (NeRF) and Gaussian Splatting, we explored how factors like camera orientation, filming speed, data layering, and scanning path affect the detail and clarity of 3D reconstructions. Through experiments in a mock crime scene apartment, we identified optimal filming methods that reduce noise and art... Abstract
International archives of allergy and immunology, 18 3 2025, Pages 1-9 A Growing Cause of Food Allergies in Children: Sesame. Aytekin Güvenir F, Yörüsün G, Geniş C, Yılmaz D, Selmanoğlu A, Şengül Emeksiz Z, Dibek Mısırlıoğlu E
Introduction: Sesame allergy has been seen with increasing frequency in recent years and is one of the important causes of food anaphylaxis. The aim of our study was to examine the clinical and laboratory features of patients with sesame allergy and to evaluate the characteristics of sesame-related anaphylaxis. Methods: Patients diagnosed with sesame allergy at Ankara Bilkent City Hospital between January 2017 and June 2024 were included in the study. Demographic, clinical, and laboratory data o... Abstract
Cited 1 times since 2025 (3.4 per year) source: EuropePMC
The surgeon : journal of the Royal Colleges of Surgeons of Edinburgh and Ireland, Volume 23, Issue 2, 18 3 2025, Pages 78-86 Surgeon personality diversity across generations and subspecialties. Sier VQ, Schmitz RF, Wertenbroek RWAM, Schepers A, van der Vorst JR, SUPER Collaborators
Background: Traditional exploration of surgical professionals' personality traits focuses on general characteristics at the domain-level of the five-factor model. Personality has been related to clinically-relevant areas such as clinical decision-making and team effectiveness, yet there is limited insight in the personality of surgeons at the facet-level of the Big Five. Here, we performed a large-scale study examining domain- and facet-variations of personality in four surgical generations... Abstract
The Journal of thoracic and cardiovascular surgery, 17 3 2025, Pages S0022-5223(25)00120-5 Valve-sparing aortic root replacement in bicuspid aortic valves-the reimplantation technique: A multicenter study. Arabkhani B, Boodhwani M, De Paulis R, Chen EP, Koolbergen D, Mastrobuoni S, Aphram G, Salica A, Jahanyar J, El Khoury G, de Kerchove L
Objective: Reported outcomes in patients with bicuspid aortic valves (BAVs) undergoing valve-sparing aortic root replacement (VSRR) are scarce. This study aims to evaluate outcomes in patients with BAV using the reimplantation (David) technique. Methods: Consecutive adult patients with BAV, aortic root aneurysm, and/or aortic valve insufficiency (AI) undergoing VSRR (reimplantation) were included from 5 centers experienced in reimplantation procedures. Patients were subcategorized into 2 groups... Abstract
Open heart, Volume 12, Issue 1, 17 3 2025, Pages e002846 Clinical use and impact of mechanical circulatory support for myocardial infarction-related cardiogenic shock in the Netherlands: a registry-based propensity-matched analysis. Bogerd M, Griffioen AM, Bunge JJH, Peters EJ, Ten Berg S, Timmermans MJC, Kraaijeveld AO, Lipsic E, Otterspoor LC, Bleeker G, Montero-Cabezas JM, Sjauw KD, Meuwissen M, Dubois EA, van Geuns RM, Henriques JPS, PCI Registration Committee of the Netherlands Heart Registration
Background: Despite limited beneficial evidence, mechanical circulatory support (MCS) is commonly used in patients with acute myocardial infarction-related cardiogenic shock (AMI-CS). In this Dutch registry, we investigated MCS usage, associated patient characteristics and clinical outcomes. Methods: This real-world, multicentre registry included CS patients undergoing percutaneous coronary intervention between 2017 and 2021 in 14 Dutch hospitals. The impact on clinical outcomes was analysed aft... Abstract
Cell biochemistry and biophysics, 14 2 2025 Juglone Encapsulation in PLGA Nanoparticles Improves Solubility and Enhances Apoptosis in HeLa Cells. Yilmaz DE, Gumus B, Demirci H
The anticancer potential of juglone, a naphthoquinone derived from walnut trees, has been extensively studied; however, its hydrophobicity and toxicity obstruct its therapeutic applications. This study aimed to overcome these challenges by encapsulating juglone into poly (lactic-co-glycolic acid) (PLGA) nanoparticles and evaluating their antiproliferative and apoptotic effects on HeLa cells. Juglone nanoparticles (JNP) were obtained by single emulsion solvent evaporation method. Its key physicoc... Abstract
Neural networks : the official journal of the International Neural Network Society, Volume 186, 14 2 2025, Pages 107256 Spiking neural networks on FPGA: A survey of methodologies and recent advancements. Karamimanesh M, Abiri E, Shahsavari M, Hassanli K, van Schaik A, Eshraghian J
The mimicry of the biological brain's structure in information processing enables spiking neural networks (SNNs) to exhibit significantly reduced power consumption compared to conventional systems. Consequently, these networks have garnered heightened attention and spurred extensive research endeavors in recent years, proposing various structures to achieve low power consumption, high speed, and improved recognition ability. However, researchers are still in the early stages of developing m... Abstract
The American journal of cardiology, Volume 243, 13 2 2025, Pages 45-49 Survival After Endocarditis Surgery Needing Venoarterial Extracorporeal Membrane Oxygenation Support: Results from the Netherlands Heart Registration. Heinen FJ, Akin S, van den Brink FS, Ayan K, Hermanns H, van der Stoel MD, Post MC, Klautz RJM, Tanis W, Cardiothoracic Surgery Registration Committee of the Netherlands Heart Registration
The incidence of venoarterial extracorporeal membrane oxygenation (VA-ECMO) support after cardiac surgery ranges from 0.4% to 3.7%, with in-hospital mortality rates reported at 60%. While the incidence of VA-ECMO after endocarditis (IE) surgery is unknown, these patients may face an even greater mortality risk due to additional IE-related complications. The primary objective of this study is to investigate the incidence and mortality rates of postoperative VA-ECMO following endocarditis surgery.... Abstract
Journal of comparative psychology (Washington, D.C. : 1983), 13 2 2025 Sensitivity to immature skill deficits. Food sharing experiments in squirrel monkeys (Saimiri boliviensis) and common marmosets (Callithrix jacchus). Sehner S, Willems EP, Baumeyer A, Davis L, van Schaik CP, Burkart JM
Sharing food with immature individuals is costly and should therefore only occur when the benefits outweigh the costs. Accordingly, sharing typically decreases when immature individuals get older and become more proficient independent foragers. Providers would gain more if they could adjust food sharing not only to immature age but also to their skill level. Such sensitivity to others' skill deficits is expected to be rare, but may be found in species with high prosociality and other-regard... Abstract
Neurological sciences : official journal of the Italian Neurological Society and of the Italian Society of Clinical Neurophysiology, Volume 46, Issue 6, 12 2 2025, Pages 2819-2828 Phenotypic diversity in NAXE mutations. Solmaz I, Yalnızoğlu D, Dursun A, Çıkı K, Akar HT, Özgül RK, Koşukçu C, Sezer A, Çağdaş D, Esenboğa S, Özbek B, Aygün D, Yılmaz DY, Parlak Ş, Göçmen R, Oğuz KK, Anlar B
Background/aim: NAD(P)HX epimerase (NAXE) gene mutations have been associated with early onset progressive encephalopathy. We present three patients with NAXE gene mutations and different initial manifestations. Cases: Patient(P)1 was a 30 month-old boy whose neurological regression started after an infection and progressed, ultimately leading to death one year later. His brain magnetic resonance imaging (MRI) findings were suggesting metabolic stroke. P2, nine year-old sister of P1, had mild de... Abstract
Applied and environmental microbiology, Volume 91, Issue 3, 12 2 2025, Pages e0179424 Microfluidic droplets with amended culture media cultivate a greater diversity of soil microorganisms. Dai J, Ouyang Y, Gupte R, Liu XJA, Li Y, Yang F, Chen S, Provin T, Van Schaik E, Samuel JE, Jayaraman A, Zhou A, de Figueiredo P, Zhou J, Han A
Uncultivated but abundant soil microorganisms have untapped potential for producing broad ranges of natural products, as well as for bioremediation. However, cultivating soil microorganisms while maintaining a broad microorganism diversity to enable phenotyping and functional analysis of as diverse individual isolates as possible remains challenging. In this study, we developed and tested the ability of several culture media formulations that contain defined soil metabolites or soil extracts to... Abstract
Cited 2 times since 2025 (6.4 per year) source: EuropePMC
Lupus science & medicine, Volume 12, Issue 1, 12 2 2025, Pages e001424 Long-term safety and efficacy of the combination of belimumab and rituximab in the treatment of severe and refractory SLE: a preliminary report. van Schaik M, Arends EJ, Wetzels MJAL, Kraaij T, Verbruggen SH, van der Kooij SW, Kamerling SWA, Huizinga T, Goekoop RJ, van Kooten C, Rabelink T, Teng YKO
Objective: Combination therapy with rituximab and belimumab is a novel treatment strategy for severe SLE and lupus nephritis. Phase II studies have shown promising results, although long-term data are currently lacking. To address this, we analysed outcomes of patients with severe treatment-refractory SLE who previously participated in the phase II Synbiose Study, with a particular focus on immunological parameters. Methods: Eight patients continued belimumab treatment beyond the 2-year duration... Abstract
Cited 3 times since 2025 (9.5 per year) source: EuropePMC
Nature communications, Volume 16, Issue 1, 11 2 2025, Pages 1545 The neurobench framework for benchmarking neuromorphic computing algorithms and systems. Yik J, Van den Berghe K, den Blanken D, Bouhadjar Y, Fabre M, Hueber P, Ke W, Khoei MA, Kleyko D, Pacik-Nelson N, Pierro A, Stratmann P, Sun PV, Tang G, Wang S, Zhou B, Ahmed SH, Vathakkattil Joseph G, Leto B, Micheli A, Mishra AK, Lenz G, Sun T, Ahmed Z, Akl M, Anderson B, Andreou AG, Bartolozzi C, Basu A, Bogdan P, Bohte S, Buckley S, Cauwenberghs G, Chicca E, Corradi F, de Croon G, Danielescu A, Daram A, Davies M, Demirag Y, Eshraghian J, Fischer T, Forest J, Fra V, Furber S, Furlong PM, Gilpin W, Gilra A, Gonzalez HA, Indiveri G, Joshi S, Karia V, Khacef L, Knight JC, Kriener L, Kubendran R, Kudithipudi D, Liu SC, Liu YH, Ma H, Manohar R, Margarit-Taulé JM, Mayr C, Michmizos K, Muir DR, Neftci E, Nowotny T, Ottati F, Ozcelikkale A, Panda P, Park J, Payvand M, Pehle C, Petrovici MA, Posch C, Renner A, Sandamirskaya Y, Schaefer CJS, van Schaik A, Schemmel J, Schmidgall S, Schuman C, Seo JS, Sheik S, Shrestha SB, Sifalakis M, Sironi A, Stewart K, Stewart M, Stewart TC, Timcheck J, Tömen N, Urgese G, Verhelst
Neuromorphic computing shows promise for advancing computing efficiency and capabilities of AI applications using brain-inspired principles. However, the neuromorphic research field currently lacks standardized benchmarks, making it difficult to accurately measure technological advancements, compare performance with conventional methods, and identify promising future research directions. This article presents NeuroBench, a benchmark framework for neuromorphic algorithms and systems, which is col... Abstract
BMC public health, Volume 25, Issue 1, 10 2 2025, Pages 551 The relationship between environmental literacy, ecological footprint awareness, and environmental behavior in adults. Yildirim MS, Elkoca A, Gökçay G, Yilmaz DA, Yıldız M
Background: Environmental literacy and ecological footprint awareness encouraging them to consume less energy, reduce waste and use natural resources more sustainably. Aim: In this study, the aim was to determine and compare the relationship between environmental literacy, ecological footprint awareness, and environmental behaviors of adults. Methods: The research was conducted in a descriptive and cross-sectional type. The universe of the research was individuals aged 18 and over in a province... Abstract
Cited 1 times since 2025 (3.1 per year) source: EuropePMC
BMC nursing, Volume 24, Issue 1, 10 2 2025, Pages 151 Psychometrics of the Attitude Scale towards the use of Artificial Intelligence Technologies in Nursing. Yılmaz D, Uzelli D, Dikmen Y
Background: It is clear that nursing practice is directly affected by artificial intelligence (AI), and in this regard, a need is felt for more information on the knowledge and attitudes of nurses to the use of AI technology in nursing care practice. However, no inclusive measurement instrument tested for validity and reliability evaluating the attitudes of nurses to the use of AI technology was found. The aim of this research was to develop and test the validity of the Attitude Scale Towards th... Abstract
Cureus, Volume 17, Issue 2, 9 2 2025, Pages e78781 Patients' Perceptions and Experiences With Outpatient Hip and Knee Arthroplasty: A Qualitative Study. Keulen MH, Boonen B, Leenders AM, Van Haaren EH, Schotanus MG, Bemelmans YF
Background Outpatient joint arthroplasty (OJA) of the hip and knee is becoming increasingly popular within the orthopedic community. Most evidence regarding the safety and feasibility of OJA has been gathered from the perspectives of surgeons and healthcare organizations. However, the success of these pathways also hinges on patients feeling safe and adequately prepared to return home. This study aimed to explore patients' perspectives, experiences, and challenges during the preoperative ph... Abstract
Cited 1 times since 2025 (3.1 per year) source: EuropePMC
European journal of preventive cardiology, 8 2 2025, Pages zwaf067 Apolipoprotein C3 and risk of cardiovascular events and death in patients on optimized statin treatment after recent acute coronary syndrome. Schwartz GG, Szarek M, Reijnders E, Jukema JW, Bhatt DL, Bittner VA, Fazio S, Garon G, Goodman SG, Harrington RA, White HD, Ruhaak LR, Stevanovic I, Cobbaert CM, Steg PG
Aims: Apolipoprotein (Apo) C3 has been associated with incident coronary heart disease and major adverse cardiovascular events (MACE). Whether ApoC3 levels predict risk in patients with acute coronary syndrome (ACS) on optimized statin treatment is unknown. Methods: ApoC3 was measured by mass spectrometry at baseline (n=11,956) and after 4 months' treatment (M4; n=11 176) with alirocumab or placebo in the ODYSSEY OUTCOMES trial. Patients with fasting triglycerides >400 mg/dL were exclude... Abstract
PharmacoEconomics, Volume 43, Issue 5, 8 2 2025, Pages 483-497 Towards Recommendations for Cost-Effectiveness Analysis of Predictive, Prognostic, and Serial Biomarker Tests in Oncology. Kramer A, van Schaik LF, van den Broek D, Meijer GA, Gutierrez Ibarluzea I, Galnares Cordero L, Fijneman RJA, Ligtenberg MJL, Schuuring E, van Harten WH, Coupé VMH, Retèl VP, COIN Consortium
Background: Cost-effectiveness analysis (CEA) of biomarkers is challenging due to the indirect impact on health outcomes and the lack of sufficient fit-for-purpose data. Hands-on guidance is lacking. Objective: We aimed firstly to explore how CEAs in the context of three different types of biomarker applications have addressed these challenges, and secondly to develop recommendations for future CEAs. Methods: A scoping review was performed for three biomarker applications: predictive, prognostic... Abstract
Environmental monitoring and assessment, Volume 197, Issue 3, 7 1 2025, Pages 252 Investigating the effects of local climate zones on land surface temperature using spectral indices via linear regression model: a seasonal study of Sapanca Lake. Isinkaralar O, Yeboah E, Isinkaralar K, Sarfo I, Öztürk S, Yilmaz D, Bojago E
The formation of urban heat islands is a widespread issue in cities. However, the impact of spectral indices on land surface temperature (LST) with various urban forms, climates, and functions has not been sufficiently examined. Currently, the prevalent method for analyzing complex urban areas is the classification of local climate zones (LCZs). In this study, we aim to explore the urban thermal environment by utilizing GIS-based spatial analyses and statistical methods. We also examine LCZs and... Abstract
Cancer discovery, 6 1 2025 High-purity CTC RNA sequencing identifies prostate cancer lineage phenotypes prognostic for clinical outcomes. Sharifi MN, Sperger JM, Taylor AK, Tippins KE, Reese SR, Carreno V, Kaufmann KR, Chang AH, Nunamaker LA, Linebarger C, Mora-Rodriguez L, Schehr JL, Krause HM, Helzer KT, Bootsma ML, Blitzer GC, Floberg JM, Kyriakopoulos CE, Emamekhoo H, Heath EI, Wells M, Tagawa ST, Sjöström M, Choudhury AD, Yu M, Armstrong AJ, Rathkopf DE, Beltran H, Nelson PS, Feng FY, Dehm SM, Kosoff D, Wei XX, McKay RR, Zhao SG, Lang JM
The development of treatment resistance remains universal for patients with metastatic prostate cancer, driven by AR alterations and lineage state transitions. Identifying the evolution of lineage transitions in treatment resistance has been limited by the challenges of collecting serial tissue biopsies on treatment, which can be overcome using blood-based liquid biopsies. Utilizing a novel circulating tumor cell (CTC) isolation approach, we collected 273 CTC samples from 117 patients with metas... Abstract